scglue.models.dx.integration_consistency

scglue.models.dx.integration_consistency(model, adatas, graph, **kwargs)

Integration consistency score, defined as the consistency between aligned-space meta-cell correlation and the guidance graph

Parameters

• model (scglue.models.scglue.SCGLUEModel) – Integration model to be evaluated

• adatas (typing.Mapping[str, AnnData]) – Datasets (indexed by modality name)

• graph (Graph) – Guidance graph

• **kwargs – Additional keyword arguments are passed to scglue.data.metacell_corr()

Return type

DataFrame

Returns

consistency_df – Consistency score at different numbers of meta cells