scglue.models.scglue.SCGLUEModel.decode_data
- SCGLUEModel.decode_data(source_key, target_key, adata, graph, target_libsize=None, target_batch=None, batch_size=128)[source]
Decode data
- Parameters
source_key (
str
) – Source modality keytarget_key (
str
) – Target modality keyadata (
AnnData
) – Source modality datagraph (
Graph
) – Guidance graphtarget_libsize (
typing.Union
[float
,numpy.ndarray
,None
]) – Target modality library size, by default 1.0target_batch (
typing.Optional
[numpy.ndarray
]) – Target modality batch, by default batch 0batch_size (
int
) – Size of minibatches
- Return type
- Returns
decoded – Decoded data
Note
This is EXPERIMENTAL!