scglue.models.scglue.PairedSCGLUEModel

class scglue.models.scglue.PairedSCGLUEModel(adatas, vertices, latent_dim=50, h_depth=2, h_dim=256, dropout=0.2, shared_batches=False, random_seed=0)

基类：SCGLUEModel

GLUE model for partially-paired single-cell multi-omics data integration

参数:

• adatas (typing.Mapping[str, AnnData]) – Datasets (indexed by modality name)

• vertices (typing.List[str]) – Guidance graph vertices (must cover feature names in all modalities)

• latent_dim (int) – Latent dimensionality

• h_depth (int) – Hidden layer depth for encoder and discriminator

• h_dim (int) – Hidden layer dimensionality for encoder and discriminator

• dropout (float) – Dropout rate

• shared_batches (bool) – Whether the same batches are shared across modalities

• random_seed (int) – 随机种子

方法

compile

为模型训练做准备

属性

logger