scglue.genomics.Gtf

class scglue.genomics.Gtf(*args, **kwargs)[source]

Bases: ConstrainedDataFrame

GTF format data frame

Methods

read_gtf

Read GTF file

rectify

Rectify data frame for format integrity

split_attribute

Extract all attributes from the "attribute" column and append them to existing columns

to_bed

Convert GTF to BED format

verify

Verify data frame for format integrity

Attributes

COLUMNS