scglue.models.scglue.SCGLUE

class scglue.models.scglue.SCGLUE(g2v, v2g, x2u, u2x, idx, du, prior, u2c=None)

Bases: GLUE

GLUE network for single-cell multi-omics data integration

Parameters:

• g2v (scglue.models.sc.GraphEncoder) – Graph encoder

• v2g (scglue.models.sc.GraphDecoder) – Graph decoder

• x2u (typing.Mapping[str, scglue.models.sc.DataEncoder]) – Data encoders (indexed by modality name)

• u2x (typing.Mapping[str, scglue.models.sc.DataDecoder]) – Data decoders (indexed by modality name)

• idx (typing.Mapping[str, torch.Tensor]) – Feature indices among graph vertices (indexed by modality name)

• du (scglue.models.sc.Discriminator) – Modality discriminator

• prior (scglue.models.sc.Prior) – Latent prior

• u2c (typing.Optional[scglue.models.sc.Classifier]) – Data classifier

Methods

Attributes