scglue
Contents:
Installation guide
Tutorials
Example datasets
API documentation
scglue
scglue.check
scglue.data
scglue.data.aggregate_obs
scglue.data.aggregate_var
scglue.data.bedmap2anndata
scglue.data.calc_hypo_score
scglue.data.count_prep
scglue.data.estimate_balancing_weight
scglue.data.extract_rank_genes_groups
scglue.data.get_gene_annotation
scglue.data.get_metacells
scglue.data.lsi
scglue.data.merge_mc_cov
scglue.data.metacell_corr
scglue.data.metacell_regr
scglue.data.transfer_labels
scglue.data.AllCoolsLSI
scglue.genomics
scglue.graph
scglue.metrics
scglue.models
scglue.num
scglue.plot
scglue.typehint
scglue.utils
Release notes
Developer guide
Credits
scglue
API documentation
scglue
scglue.data
scglue.data.AllCoolsLSI
View page source
scglue.data.AllCoolsLSI
class
scglue.data.
AllCoolsLSI
(
scale_factor
=
100000
,
n_components
=
100
,
algorithm
=
'arpack'
,
random_state
=
0
,
n_iter
=
5
,
idf
=
None
,
model
=
None
)
[source]
Bases:
object
Methods
fit
fit_transform
transform