scglue.genomics.generate_prot_guidance_graph
- scglue.genomics.generate_prot_guidance_graph(rna, prot, protein_gene_match)[source]
Generate the guidance graph based on CITE-seq datasets.
- Parameters:
rna (
AnnData) – AnnData with gene expression information.prot (
AnnData) – AnnData with protein expression information.protein_gene_match (
typing.Mapping[str,str]) – The dictionary used to match proteins with genes.
- Returns:
guidance – The guidance map between proteins and genes.