scglue.genomics.write_links

scglue.genomics.write_links(graph, source, target, file, keep_attrs=None)

Export regulatory graph into a links file

Parameters:

• graph (Graph) – Regulatory graph

• source (scglue.genomics.Bed) – Genomic coordinates of source nodes

• target (scglue.genomics.Bed) – Genomic coordinates of target nodes

• file (os.PathLike) – Output file

• keep_attrs (typing.Optional[typing.List[str]]) – A list of attributes to keep for each link

Return type:

None