scglue.metrics.seurat_alignment_score

scglue.metrics.seurat_alignment_score(x, y, neighbor_frac=0.01, n_repeats=4, random_state=None, **kwargs)

Seurat alignment score

参数:

• x (numpy.ndarray) – 坐标

• y (numpy.ndarray) – Batch labels

• neighbor_frac (float) – Nearest neighbor fraction

• n_repeats (int) – Number of subsampling repeats

• random_state (typing.Union[RandomState, int, None]) – 随机状态

• **kwargs – Additional keyword arguments are passed to sklearn.neighbors.NearestNeighbors

返回类型:

float

返回:

sas – Seurat alignment score