scglue.metrics.avg_silhouette_width

scglue.metrics.avg_silhouette_width(x, y, **kwargs)[source]

Cell type average silhouette width

Parameters:

x (numpy.ndarray) – Coordinates
y (numpy.ndarray) – Cell type labels
**kwargs – Additional keyword arguments are passed to sklearn.metrics.silhouette_score()

Return type:

float

Returns:

asw – Cell type average silhouette width

Note